BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039A06SP1|AL430637
(722 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig502 808 0.0
>3x_Contig502
Length = 1468
Score = 808 bits (388), Expect = 0.0
Identities = 417/438 (95%)
Strand = Plus / Minus
Query: 284 ccataaacaatggatggggatgggtatttattttattattaatatatatttttatatata 343
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 ccattaacaatggatggggatgggtatttattttattattaatatatatttttatatata 761
Query: 344 avasavkaaacvaggacaaagagacttgaactcctaatgattgatttgaaatcaatagtt 403
| | | |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aaataataaacaaggacaaagagacttgaactcctaatgattgatttgaaatcaatagtt 701
Query: 404 ttaccattaaactatatcctctttacccgcgctaatgggtcatctacccccatatagggg 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ttaccattaaactatatcctctttacccgcgctaatgggtcatctacccccatatagggg 641
Query: 464 gtggatgaacccgcgcggggagtatataabvsttvbsakbatbatkavbbsctacccaac 523
||||||||||||||||||||||||||||| || | || || | |||||||||
Sbjct: 640 gtggatgaacccgcgcggggagtatataataattattattattattaattcctacccaac 581
Query: 524 cttcctcaccttcaatatctgcgcaccatgtgtgcaacaggaaggtgagcatgttatggg 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 cttcctcaccttcaatatctgcgcaccatgtgtgcaacaggaaggtgagcatgttatggg 521
Query: 584 ttggggggatataattattaaattacccataatadtgggtagaataaaaaaaaagtgaat 643
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 520 ttggggggatataattattaaattacccataatattgggtagaataaaaaaaaagtgaat 461
Query: 644 atttaagatattaataagcccaccgcagttcccctacggtaactgtatttcaacttcgca 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atttaagatattaataagcccaccgcagttcccctacggtaactgtatttcaacttcgca 401
Query: 704 ttaattcgtaatatttct 721
||||||||||||||||||
Sbjct: 400 ttaattcgtaatatttct 383
Score = 196 bits (94), Expect = 6e-50
Identities = 99/101 (98%)
Strand = Plus / Minus
Query: 1 ataaatacggaaccccaaaggaatattatataatcagttttatattatatattaatatat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1098 ataaatactgaaccccaaaggaatattatataatcagttttatattatatattaatatat 1039
Query: 61 aatatacgtaaattagtattattattaaataatatanaata 101
|||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1038 aatatacgtaaattagtattattattaaataatatataata 998
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.718 1.36
Gapped
Lambda K H
1.44 0.718 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,072
Number of Sequences: 1807
Number of extensions: 16072
Number of successful extensions: 3576
Number of sequences better than 1.0e-20: 1
length of query: 722
length of database: 10,358,551
effective HSP length: 16
effective length of query: 706
effective length of database: 10,329,639
effective search space: 7292725134
effective search space used: 7292725134
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.1 bits)
S1: 11 (23.4 bits)
S2: 48 (100.4 bits)